Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cps1Q8C196 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cps1Q8C196 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cps1Q8C196 Trav13-3-201ENSMUST00000117226 336 ntBASIC20.1■□□□□ 0.81
Cps1Q8C196 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cps1Q8C196 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC20.1■□□□□ 0.81
Cps1Q8C196 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC20.1■□□□□ 0.81
Cps1Q8C196 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC20.1■□□□□ 0.81
Cps1Q8C196 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cps1Q8C196 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cps1Q8C196 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.1■□□□□ 0.81
Cps1Q8C196 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cps1Q8C196 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cps1Q8C196 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC20.09■□□□□ 0.81
Cps1Q8C196 CT030657.3-201ENSMUST00000222707 1200 ntBASIC20.09■□□□□ 0.81
Cps1Q8C196 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cps1Q8C196 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.08■□□□□ 0.81
Cps1Q8C196 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
Cps1Q8C196 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cps1Q8C196 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cps1Q8C196 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cps1Q8C196 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC20.08■□□□□ 0.81
Cps1Q8C196 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC20.08■□□□□ 0.81
Cps1Q8C196 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cps1Q8C196 Gm9182-201ENSMUST00000217829 639 ntBASIC20.08■□□□□ 0.81
Cps1Q8C196 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cps1Q8C196 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cps1Q8C196 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cps1Q8C196 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cps1Q8C196 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cps1Q8C196 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cps1Q8C196 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cps1Q8C196 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cps1Q8C196 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Gm18062-201ENSMUST00000208020 547 ntBASIC20.07■□□□□ 0.8
Cps1Q8C196 Gm18055-201ENSMUST00000208254 547 ntBASIC20.07■□□□□ 0.8
Cps1Q8C196 AC238811.3-201ENSMUST00000225422 709 ntBASIC20.07■□□□□ 0.8
Cps1Q8C196 AC123645.1-201ENSMUST00000228469 605 ntBASIC20.07■□□□□ 0.8
Cps1Q8C196 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC20.07■□□□□ 0.8
Cps1Q8C196 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cps1Q8C196 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cps1Q8C196 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cps1Q8C196 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC20.06■□□□□ 0.8
Cps1Q8C196 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cps1Q8C196 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms