Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm14057-201ENSMUST00000120631 482 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Rprl2-201ENSMUST00000157150 290 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm44335-201ENSMUST00000196879 141 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm44297-201ENSMUST00000198304 141 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm44346-201ENSMUST00000198851 141 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm18057-201ENSMUST00000208220 503 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubr7Q8BU04 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Gm6973-201ENSMUST00000117080 721 ntBASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ubr7Q8BU04 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Mir6990-201ENSMUST00000183724 91 ntBASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr7Q8BU04 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr7Q8BU04 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr7Q8BU04 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr7Q8BU04 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Ubr7Q8BU04 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr7Q8BU04 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms