Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Gm14722-201ENSMUST00000118943 689 ntBASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpne3Q8BT60 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cpne3Q8BT60 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Gm8097-201ENSMUST00000117903 829 ntBASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cpne3Q8BT60 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpne3Q8BT60 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms