Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rd3Q8BRE0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rd3Q8BRE0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rd3Q8BRE0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.04■□□□□ 0.16
Rd3Q8BRE0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rd3Q8BRE0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rd3Q8BRE0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rd3Q8BRE0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rd3Q8BRE0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Gm6973-201ENSMUST00000117080 721 ntBASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Gm5779-201ENSMUST00000218467 910 ntBASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rd3Q8BRE0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rd3Q8BRE0 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm22065-201ENSMUST00000103753 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm22066-201ENSMUST00000103761 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24932-201ENSMUST00000103763 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24115-201ENSMUST00000103799 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm22190-201ENSMUST00000103827 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm22191-201ENSMUST00000103831 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24721-201ENSMUST00000103849 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm28018-201ENSMUST00000103869 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm26399-201ENSMUST00000103937 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm25349-201ENSMUST00000177728 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm23616-201ENSMUST00000177797 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm25871-201ENSMUST00000177816 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24752-201ENSMUST00000178240 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24496-201ENSMUST00000178287 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm25649-201ENSMUST00000178476 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm25548-201ENSMUST00000178681 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm23147-201ENSMUST00000178841 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm26095-201ENSMUST00000179270 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm22171-201ENSMUST00000179283 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm23936-201ENSMUST00000179354 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm22619-201ENSMUST00000179516 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm25255-201ENSMUST00000179579 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24755-201ENSMUST00000179691 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm26506-201ENSMUST00000179692 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm25086-201ENSMUST00000179931 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm23243-201ENSMUST00000180047 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24659-201ENSMUST00000180212 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm24169-201ENSMUST00000180244 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm23689-201ENSMUST00000180354 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm27359-201ENSMUST00000184153 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm27785-201ENSMUST00000184268 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm27466-201ENSMUST00000184396 110 ntBASIC16.01■□□□□ 0.15
Rd3Q8BRE0 Gm27703-201ENSMUST00000184836 110 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms