Protein–RNA interactions for Protein: Q8BGR1

Pdzph1, MCG20355, mousemouse

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzph1Q8BGR1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzph1Q8BGR1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdzph1Q8BGR1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Gm6266-201ENSMUST00000203844 806 ntBASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdzph1Q8BGR1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Mir1938-201ENSMUST00000158746 100 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm29310-201ENSMUST00000185468 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21825-201ENSMUST00000185728 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm29109-201ENSMUST00000185895 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21896-201ENSMUST00000186520 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21873-201ENSMUST00000186728 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21794-201ENSMUST00000187056 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21880-201ENSMUST00000187275 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21826-201ENSMUST00000187451 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21198-201ENSMUST00000188393 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21749-201ENSMUST00000189343 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21901-201ENSMUST00000189568 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm29424-201ENSMUST00000189716 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm28599-201ENSMUST00000189838 694 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21867-201ENSMUST00000189917 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm29269-201ENSMUST00000190087 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21722-201ENSMUST00000190153 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm28423-201ENSMUST00000190701 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21899-201ENSMUST00000190745 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21910-201ENSMUST00000191163 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21849-201ENSMUST00000191571 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm28678-201ENSMUST00000191593 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm20910-201ENSMUST00000193268 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Gm21871-201ENSMUST00000194621 696 ntBASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pdzph1Q8BGR1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Gm11918-201ENSMUST00000121660 179 ntBASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.95■□□□□ 0.46
Pdzph1Q8BGR1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms