Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vrk1Q80X41 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vrk1Q80X41 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vrk1Q80X41 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Vrk1Q80X41 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.46□□□□□ -0.09
Vrk1Q80X41 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.46□□□□□ -0.09
Vrk1Q80X41 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vrk1Q80X41 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vrk1Q80X41 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Vrk1Q80X41 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vrk1Q80X41 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.45□□□□□ -0.1
Vrk1Q80X41 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.45□□□□□ -0.1
Vrk1Q80X41 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Gm25948-201ENSMUST00000175334 112 ntBASIC14.45□□□□□ -0.1
Vrk1Q80X41 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.45□□□□□ -0.1
Vrk1Q80X41 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Gm10154-201ENSMUST00000084445 354 ntBASIC14.45□□□□□ -0.1
Vrk1Q80X41 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vrk1Q80X41 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.45□□□□□ -0.1
Vrk1Q80X41 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vrk1Q80X41 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.44□□□□□ -0.1
Vrk1Q80X41 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Gm18057-201ENSMUST00000208220 503 ntBASIC14.44□□□□□ -0.1
Vrk1Q80X41 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.44□□□□□ -0.1
Vrk1Q80X41 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.44□□□□□ -0.1
Vrk1Q80X41 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.44□□□□□ -0.1
Vrk1Q80X41 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vrk1Q80X41 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Mir449b-201ENSMUST00000104833 80 ntBASIC14.43□□□□□ -0.1
Vrk1Q80X41 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.43□□□□□ -0.1
Vrk1Q80X41 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vrk1Q80X41 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.43□□□□□ -0.1
Vrk1Q80X41 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms