Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Gm10154-201ENSMUST00000084445 354 ntBASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh19Q80TF3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.83□□□□□ -0.03
Pcdh19Q80TF3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.83□□□□□ -0.03
Pcdh19Q80TF3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh19Q80TF3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh19Q80TF3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh19Q80TF3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.83□□□□□ -0.03
Pcdh19Q80TF3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh19Q80TF3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Gm45612-201ENSMUST00000211320 160 ntBASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh19Q80TF3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 App-207ENSMUST00000227737 2827 ntBASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh19Q80TF3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Gm14701-201ENSMUST00000117156 348 ntBASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Gm16198-201ENSMUST00000118766 670 ntBASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Rprl2-201ENSMUST00000157150 290 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms