Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Mzt1-203ENSMUST00000227948 952 ntBASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm8Q6ZWM4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Gm18733-201ENSMUST00000173950 856 ntBASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Gm27300-201ENSMUST00000184085 97 ntBASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Gm27335-201ENSMUST00000184758 97 ntBASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lsm8Q6ZWM4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.84■□□□□ 0.13
Lsm8Q6ZWM4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms