Protein–RNA interactions for Protein: Q6W8Q3

Pcp4l1, Purkinje cell protein 4-like protein 1, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4l1Q6W8Q3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcp4l1Q6W8Q3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcp4l1Q6W8Q3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcp4l1Q6W8Q3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcp4l1Q6W8Q3 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcp4l1Q6W8Q3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcp4l1Q6W8Q3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcp4l1Q6W8Q3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcp4l1Q6W8Q3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcp4l1Q6W8Q3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 AC117769.4-201ENSMUST00000225679 685 ntBASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcp4l1Q6W8Q3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcp4l1Q6W8Q3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms