Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Gm29707-201ENSMUST00000196325 491 ntBASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Gm7213-201ENSMUST00000215977 950 ntBASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf220Q6PDX6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf220Q6PDX6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Gm13436-201ENSMUST00000120418 567 ntBASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf220Q6PDX6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf220Q6PDX6 Gm11336-201ENSMUST00000118168 334 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms