Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.06■□□□□ 0.48
Col11a2Q64739 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col11a2Q64739 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col11a2Q64739 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.06■□□□□ 0.48
Col11a2Q64739 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Col11a2Q64739 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 AA619741-201ENSMUST00000195095 646 ntBASIC18.06■□□□□ 0.48
Col11a2Q64739 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col11a2Q64739 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.05■□□□□ 0.48
Col11a2Q64739 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col11a2Q64739 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col11a2Q64739 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.05■□□□□ 0.48
Col11a2Q64739 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Gm13392-201ENSMUST00000117708 150 ntBASIC18.05■□□□□ 0.48
Col11a2Q64739 Gm13226-201ENSMUST00000117838 404 ntBASIC18.05■□□□□ 0.48
Col11a2Q64739 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Col11a2Q64739 Gm5354-201ENSMUST00000182417 973 ntBASIC18.05■□□□□ 0.48
Col11a2Q64739 Gm33320-201ENSMUST00000192232 530 ntBASIC18.05■□□□□ 0.48
Col11a2Q64739 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.05■□□□□ 0.48
Col11a2Q64739 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.05■□□□□ 0.48
Col11a2Q64739 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col11a2Q64739 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.04■□□□□ 0.48
Col11a2Q64739 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Gm27839-201ENSMUST00000184242 106 ntBASIC18.04■□□□□ 0.48
Col11a2Q64739 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.04■□□□□ 0.48
Col11a2Q64739 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.04■□□□□ 0.48
Col11a2Q64739 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.04■□□□□ 0.48
Col11a2Q64739 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.04■□□□□ 0.48
Col11a2Q64739 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Col11a2Q64739 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col11a2Q64739 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Col11a2Q64739 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Col11a2Q64739 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Col11a2Q64739 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Col11a2Q64739 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Col11a2Q64739 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.03■□□□□ 0.48
Col11a2Q64739 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Col11a2Q64739 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col11a2Q64739 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col11a2Q64739 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.02■□□□□ 0.48
Col11a2Q64739 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col11a2Q64739 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.02■□□□□ 0.48
Col11a2Q64739 Gm28911-201ENSMUST00000188837 117 ntBASIC18.02■□□□□ 0.48
Col11a2Q64739 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.02■□□□□ 0.48
Col11a2Q64739 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col11a2Q64739 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.02■□□□□ 0.48
Col11a2Q64739 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Col11a2Q64739 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col11a2Q64739 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col11a2Q64739 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col11a2Q64739 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms