Protein–RNA interactions for Protein: Q63ZW6

Col4a5, Col4a5 protein, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a5Q63ZW6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a5Q63ZW6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a5Q63ZW6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col4a5Q63ZW6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a5Q63ZW6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a5Q63ZW6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a5Q63ZW6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a5Q63ZW6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Dancr-204ENSMUST00000132389 2347 ntBASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col4a5Q63ZW6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Gm12957-201ENSMUST00000117835 377 ntBASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a5Q63ZW6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.71■□□□□ 0.43
Col4a5Q63ZW6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Gm13226-201ENSMUST00000117838 404 ntBASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Gm9002-201ENSMUST00000178437 499 ntBASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Gm2495-201ENSMUST00000191160 466 ntBASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a5Q63ZW6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Gm8062-201ENSMUST00000139696 444 ntBASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Mir7654-201ENSMUST00000185082 70 ntBASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Gm28911-201ENSMUST00000188837 117 ntBASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a5Q63ZW6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col4a5Q63ZW6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a5Q63ZW6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a5Q63ZW6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a5Q63ZW6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a5Q63ZW6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a5Q63ZW6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms