Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sox17Q61473 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.22□□□□□ -0.13
Sox17Q61473 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox17Q61473 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.22□□□□□ -0.13
Sox17Q61473 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox17Q61473 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox17Q61473 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox17Q61473 Gm18101-201ENSMUST00000215769 548 ntBASIC14.22□□□□□ -0.13
Sox17Q61473 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.22□□□□□ -0.13
Sox17Q61473 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox17Q61473 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Sox17Q61473 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.22□□□□□ -0.13
Sox17Q61473 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox17Q61473 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox17Q61473 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox17Q61473 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.21□□□□□ -0.13
Sox17Q61473 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Sox17Q61473 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sox17Q61473 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox17Q61473 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Sox17Q61473 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Sox17Q61473 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sox17Q61473 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Sox17Q61473 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox17Q61473 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.2□□□□□ -0.14
Sox17Q61473 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox17Q61473 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox17Q61473 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.2□□□□□ -0.14
Sox17Q61473 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Sox17Q61473 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox17Q61473 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Sox17Q61473 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox17Q61473 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Sox17Q61473 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Sox17Q61473 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox17Q61473 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox17Q61473 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox17Q61473 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms