Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Gm9385-201ENSMUST00000117563 472 ntBASIC15.74■□□□□ 0.11
Smarcd1Q61466 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Gm11025-201ENSMUST00000140773 466 ntBASIC15.74■□□□□ 0.11
Smarcd1Q61466 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Gm45612-201ENSMUST00000211320 160 ntBASIC15.74■□□□□ 0.11
Smarcd1Q61466 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.74■□□□□ 0.11
Smarcd1Q61466 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcd1Q61466 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Asic1-205ENSMUST00000228185 1818 ntBASIC15.73■□□□□ 0.11
Smarcd1Q61466 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Gm23935-201ENSMUST00000102303 57 ntBASIC15.73■□□□□ 0.11
Smarcd1Q61466 Gm24270-201ENSMUST00000102326 57 ntBASIC15.73■□□□□ 0.11
Smarcd1Q61466 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Gm24245-201ENSMUST00000157318 57 ntBASIC15.73■□□□□ 0.11
Smarcd1Q61466 Rpph1-201ENSMUST00000175096 319 ntBASIC15.73■□□□□ 0.11
Smarcd1Q61466 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.73■□□□□ 0.11
Smarcd1Q61466 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.73■□□□□ 0.11
Smarcd1Q61466 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd1Q61466 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Mir1895-201ENSMUST00000122615 79 ntBASIC15.72■□□□□ 0.11
Smarcd1Q61466 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Gm27494-201ENSMUST00000184735 189 ntBASIC15.72■□□□□ 0.11
Smarcd1Q61466 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.72■□□□□ 0.11
Smarcd1Q61466 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.72■□□□□ 0.11
Smarcd1Q61466 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd1Q61466 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms