Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.97□□□□□ -0.17
Clcn4Q61418 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.97□□□□□ -0.17
Clcn4Q61418 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.97□□□□□ -0.17
Clcn4Q61418 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Clcn4Q61418 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.96□□□□□ -0.17
Clcn4Q61418 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Clcn4Q61418 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Gm12497-201ENSMUST00000138778 237 ntBASIC13.96□□□□□ -0.17
Clcn4Q61418 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Gm27867-201ENSMUST00000184778 125 ntBASIC13.96□□□□□ -0.17
Clcn4Q61418 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.96□□□□□ -0.17
Clcn4Q61418 Gm6376-201ENSMUST00000209407 580 ntBASIC13.96□□□□□ -0.17
Clcn4Q61418 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Clcn4Q61418 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Clcn4Q61418 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clcn4Q61418 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clcn4Q61418 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clcn4Q61418 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clcn4Q61418 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clcn4Q61418 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.95□□□□□ -0.18
Clcn4Q61418 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.95□□□□□ -0.18
Clcn4Q61418 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.95□□□□□ -0.18
Clcn4Q61418 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.95□□□□□ -0.18
Clcn4Q61418 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.95□□□□□ -0.18
Clcn4Q61418 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.95□□□□□ -0.18
Clcn4Q61418 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clcn4Q61418 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clcn4Q61418 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.94□□□□□ -0.18
Clcn4Q61418 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Clcn4Q61418 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Clcn4Q61418 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.94□□□□□ -0.18
Clcn4Q61418 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clcn4Q61418 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.94□□□□□ -0.18
Clcn4Q61418 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.94□□□□□ -0.18
Clcn4Q61418 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms