Protein–RNA interactions for Protein: Q5SFM8

Rbm27, RNA-binding protein 27, mousemouse

Known RBP Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm27Q5SFM8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm27Q5SFM8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm27Q5SFM8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Gm24513-201ENSMUST00000174964 138 ntBASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Gm27397-201ENSMUST00000184997 107 ntBASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Gm45747-201ENSMUST00000212203 999 ntBASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm27Q5SFM8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm27Q5SFM8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm27Q5SFM8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Gm15427-201ENSMUST00000117288 531 ntBASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm27Q5SFM8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms