Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Gm27301-201ENSMUST00000184012 127 ntBASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav2Q5R1I9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Gm12008-201ENSMUST00000117791 755 ntBASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Gm25911-201ENSMUST00000157621 56 ntBASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Gm43575-201ENSMUST00000196420 516 ntBASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav2Q5R1I9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gm4995-201ENSMUST00000117247 432 ntBASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gm13597-201ENSMUST00000121239 375 ntBASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gm44492-201ENSMUST00000197012 141 ntBASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Thap2-203ENSMUST00000218989 527 ntBASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.09□□□□□ -0.47
Trav2Q5R1I9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms