Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms