Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Gm44492-201ENSMUST00000197012 141 ntBASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
R3hdm4Q4VBF2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Gm16198-201ENSMUST00000118766 670 ntBASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Mir3113-201ENSMUST00000175478 76 ntBASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Gm43767-201ENSMUST00000198933 381 ntBASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
R3hdm4Q4VBF2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
R3hdm4Q4VBF2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms