Protein–RNA interactions for Protein: Q3UW77

Gm12888, MCG59630, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12888Q3UW77 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12888Q3UW77 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12888Q3UW77 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12888Q3UW77 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Gm12888Q3UW77 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12888Q3UW77 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12888Q3UW77 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12888Q3UW77 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Gm27011-201ENSMUST00000182352 972 ntBASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Gm37055-201ENSMUST00000191866 133 ntBASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Gm18959-201ENSMUST00000208954 655 ntBASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12888Q3UW77 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Gm7889-201ENSMUST00000185591 958 ntBASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Gm45058-201ENSMUST00000205810 766 ntBASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm12888Q3UW77 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm12888Q3UW77 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms