Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa3Q3UPR0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Gm10052-201ENSMUST00000168019 960 ntBASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Gm17807-201ENSMUST00000186869 298 ntBASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Gm7729-201ENSMUST00000050143 801 ntBASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Gm25007-201ENSMUST00000083808 133 ntBASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Shisa3Q3UPR0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.08□□□□□ -0.31
Shisa3Q3UPR0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shisa3Q3UPR0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shisa3Q3UPR0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shisa3Q3UPR0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms