Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gm13365-201ENSMUST00000121188 973 ntBASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gm11745-201ENSMUST00000121669 448 ntBASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Naf1Q3UMQ8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Mir1895-201ENSMUST00000122615 79 ntBASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Gm11025-201ENSMUST00000140773 466 ntBASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Naf1Q3UMQ8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Naf1Q3UMQ8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms