Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Brf2Q3UAW9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Gm10819-201ENSMUST00000099988 561 ntBASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brf2Q3UAW9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Brf2Q3UAW9 Gm7222-201ENSMUST00000117512 906 ntBASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brf2Q3UAW9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Gm17971-201ENSMUST00000190239 806 ntBASIC14.26□□□□□ -0.13
Brf2Q3UAW9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brf2Q3UAW9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms