Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.91□□□□□ -0.02
Q3KNL4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.91□□□□□ -0.02
Q3KNL4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.91□□□□□ -0.02
Q3KNL4 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.91□□□□□ -0.02
Q3KNL4 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.91□□□□□ -0.02
Q3KNL4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Q3KNL4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.91□□□□□ -0.02
Q3KNL4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.91□□□□□ -0.02
Q3KNL4 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.91□□□□□ -0.02
Q3KNL4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Q3KNL4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.9□□□□□ -0.02
Q3KNL4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Q3KNL4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.9□□□□□ -0.02
Q3KNL4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.9□□□□□ -0.02
Q3KNL4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.9□□□□□ -0.02
Q3KNL4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Q3KNL4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Q3KNL4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Q3KNL4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Q3KNL4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Q3KNL4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Q3KNL4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Q3KNL4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.89□□□□□ -0.03
Q3KNL4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.89□□□□□ -0.03
Q3KNL4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.89□□□□□ -0.03
Q3KNL4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Q3KNL4 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.89□□□□□ -0.03
Q3KNL4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Q3KNL4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Q3KNL4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Q3KNL4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Q3KNL4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Q3KNL4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Q3KNL4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Q3KNL4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.88□□□□□ -0.03
Q3KNL4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.88□□□□□ -0.03
Q3KNL4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.88□□□□□ -0.03
Q3KNL4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.88□□□□□ -0.03
Q3KNL4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Q3KNL4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Q3KNL4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Q3KNL4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Q3KNL4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms