Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm8318-201ENSMUST00000182954 872 ntBASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Celf4-206ENSMUST00000224553 1729 ntBASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Nhej1Q3KNJ2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Gm27704-201ENSMUST00000185094 107 ntBASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nhej1Q3KNJ2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nhej1Q3KNJ2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms