Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Gm2383-201ENSMUST00000181461 807 ntBASIC13.43□□□□□ -0.26
Chd8Q09XV5 Gm38002-201ENSMUST00000193255 180 ntBASIC13.43□□□□□ -0.26
Chd8Q09XV5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Gm9368-201ENSMUST00000219348 831 ntBASIC13.43□□□□□ -0.26
Chd8Q09XV5 Gm9229-201ENSMUST00000222777 126 ntBASIC13.43□□□□□ -0.26
Chd8Q09XV5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Gm8566-201ENSMUST00000120174 465 ntBASIC13.43□□□□□ -0.26
Chd8Q09XV5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.43□□□□□ -0.26
Chd8Q09XV5 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.43□□□□□ -0.26
Chd8Q09XV5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.42□□□□□ -0.26
Chd8Q09XV5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.42□□□□□ -0.26
Chd8Q09XV5 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.42□□□□□ -0.26
Chd8Q09XV5 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Gm3222-201ENSMUST00000071282 990 ntBASIC13.42□□□□□ -0.26
Chd8Q09XV5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chd8Q09XV5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.41□□□□□ -0.26
Chd8Q09XV5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Gm22323-201ENSMUST00000103832 109 ntBASIC13.41□□□□□ -0.26
Chd8Q09XV5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.41□□□□□ -0.26
Chd8Q09XV5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.4□□□□□ -0.26
Chd8Q09XV5 Mir5120-201ENSMUST00000175020 78 ntBASIC13.4□□□□□ -0.26
Chd8Q09XV5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms