Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Smn1P97801 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smn1P97801 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smn1P97801 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.01□□□□□ -0.33
Smn1P97801 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Gm43509-201ENSMUST00000196551 2594 ntBASIC13□□□□□ -0.33
Smn1P97801 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13□□□□□ -0.33
Smn1P97801 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13□□□□□ -0.33
Smn1P97801 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smn1P97801 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Smn1P97801 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13□□□□□ -0.33
Smn1P97801 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smn1P97801 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.99□□□□□ -0.33
Smn1P97801 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.99□□□□□ -0.33
Smn1P97801 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.99□□□□□ -0.33
Smn1P97801 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smn1P97801 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smn1P97801 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.98□□□□□ -0.33
Smn1P97801 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.98□□□□□ -0.33
Smn1P97801 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Smn1P97801 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smn1P97801 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smn1P97801 Gm11950-201ENSMUST00000121615 838 ntBASIC12.98□□□□□ -0.33
Smn1P97801 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms