Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.32□□□□□ -0.12
Nkx3-2P97503 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Gm4995-201ENSMUST00000117247 432 ntBASIC14.32□□□□□ -0.12
Nkx3-2P97503 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.32□□□□□ -0.12
Nkx3-2P97503 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.32□□□□□ -0.12
Nkx3-2P97503 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nkx3-2P97503 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.31□□□□□ -0.12
Nkx3-2P97503 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.31□□□□□ -0.12
Nkx3-2P97503 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx3-2P97503 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.3□□□□□ -0.12
Nkx3-2P97503 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.3□□□□□ -0.12
Nkx3-2P97503 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms