Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rpl39P62892 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Rpl39P62892 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.82□□□□□ -0.68
Rpl39P62892 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Rpl39P62892 Gm27389-201ENSMUST00000183622 195 ntBASIC10.82□□□□□ -0.68
Rpl39P62892 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.82□□□□□ -0.68
Rpl39P62892 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rpl39P62892 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Gm10812-201ENSMUST00000099864 546 ntBASIC10.82□□□□□ -0.68
Rpl39P62892 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rpl39P62892 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rpl39P62892 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.81□□□□□ -0.68
Rpl39P62892 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.81□□□□□ -0.68
Rpl39P62892 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.81□□□□□ -0.68
Rpl39P62892 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.81□□□□□ -0.68
Rpl39P62892 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rpl39P62892 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.81□□□□□ -0.68
Rpl39P62892 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Rpl39P62892 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rpl39P62892 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpl39P62892 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rpl39P62892 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rpl39P62892 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rpl39P62892 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpl39P62892 Gm13559-201ENSMUST00000120476 863 ntBASIC10.8□□□□□ -0.68
Rpl39P62892 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpl39P62892 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.8□□□□□ -0.68
Rpl39P62892 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Gm9987-201ENSMUST00000069768 567 ntBASIC10.8□□□□□ -0.68
Rpl39P62892 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rpl39P62892 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpl39P62892 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpl39P62892 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms