Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.31□□□□□ -0.12
Nup43P59235 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.31□□□□□ -0.12
Nup43P59235 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Nup43P59235 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.31□□□□□ -0.12
Nup43P59235 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Nup43P59235 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.31□□□□□ -0.12
Nup43P59235 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.31□□□□□ -0.12
Nup43P59235 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup43P59235 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nup43P59235 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Nup43P59235 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.3□□□□□ -0.12
Nup43P59235 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nup43P59235 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nup43P59235 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nup43P59235 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup43P59235 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.3□□□□□ -0.12
Nup43P59235 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nup43P59235 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.3□□□□□ -0.12
Nup43P59235 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nup43P59235 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup43P59235 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nup43P59235 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup43P59235 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.29□□□□□ -0.12
Nup43P59235 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.29□□□□□ -0.12
Nup43P59235 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup43P59235 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup43P59235 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.29□□□□□ -0.12
Nup43P59235 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.29□□□□□ -0.12
Nup43P59235 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.29□□□□□ -0.12
Nup43P59235 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nup43P59235 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Nup43P59235 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nup43P59235 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup43P59235 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Nup43P59235 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Nup43P59235 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup43P59235 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup43P59235 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup43P59235 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.28□□□□□ -0.12
Nup43P59235 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Nup43P59235 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Nup43P59235 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms