Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Gm6345-202ENSMUST00000180900 204 ntBASIC12.26□□□□□ -0.45
Sssca1P56873 Mir6982-201ENSMUST00000184354 68 ntBASIC12.26□□□□□ -0.45
Sssca1P56873 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.26□□□□□ -0.45
Sssca1P56873 Gm19164-201ENSMUST00000210667 640 ntBASIC12.26□□□□□ -0.45
Sssca1P56873 Gm9172-201ENSMUST00000212092 954 ntBASIC12.26□□□□□ -0.45
Sssca1P56873 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.26□□□□□ -0.45
Sssca1P56873 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.26□□□□□ -0.45
Sssca1P56873 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.25□□□□□ -0.45
Sssca1P56873 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sssca1P56873 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.25□□□□□ -0.45
Sssca1P56873 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sssca1P56873 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.25□□□□□ -0.45
Sssca1P56873 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sssca1P56873 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.25□□□□□ -0.45
Sssca1P56873 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Sssca1P56873 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sssca1P56873 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.25□□□□□ -0.45
Sssca1P56873 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sssca1P56873 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sssca1P56873 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sssca1P56873 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.24□□□□□ -0.45
Sssca1P56873 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.24□□□□□ -0.45
Sssca1P56873 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sssca1P56873 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sssca1P56873 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sssca1P56873 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sssca1P56873 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sssca1P56873 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms