Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm21198-201ENSMUST00000188393 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21749-201ENSMUST00000189343 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21901-201ENSMUST00000189568 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm29424-201ENSMUST00000189716 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm28599-201ENSMUST00000189838 694 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21867-201ENSMUST00000189917 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm29269-201ENSMUST00000190087 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21722-201ENSMUST00000190153 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm28423-201ENSMUST00000190701 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21899-201ENSMUST00000190745 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21910-201ENSMUST00000191163 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21849-201ENSMUST00000191571 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm28678-201ENSMUST00000191593 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm20910-201ENSMUST00000193268 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 Gm21871-201ENSMUST00000194621 696 ntBASIC15.84■□□□□ 0.13
NcanP55066 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.84■□□□□ 0.13
NcanP55066 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.84■□□□□ 0.13
NcanP55066 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.84■□□□□ 0.13
NcanP55066 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.84■□□□□ 0.13
NcanP55066 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.84■□□□□ 0.13
NcanP55066 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NcanP55066 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NcanP55066 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NcanP55066 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.83■□□□□ 0.13
NcanP55066 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NcanP55066 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NcanP55066 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.83■□□□□ 0.12
NcanP55066 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NcanP55066 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.83■□□□□ 0.12
NcanP55066 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.83■□□□□ 0.12
NcanP55066 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.83■□□□□ 0.12
NcanP55066 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.83■□□□□ 0.12
NcanP55066 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NcanP55066 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NcanP55066 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NcanP55066 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.82■□□□□ 0.12
NcanP55066 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Gm8062-201ENSMUST00000139696 444 ntBASIC15.82■□□□□ 0.12
NcanP55066 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NcanP55066 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.82■□□□□ 0.12
NcanP55066 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.82■□□□□ 0.12
NcanP55066 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.82■□□□□ 0.12
NcanP55066 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NcanP55066 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NcanP55066 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NcanP55066 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NcanP55066 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NcanP55066 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Gm6222-201ENSMUST00000120787 396 ntBASIC15.81■□□□□ 0.12
NcanP55066 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.81■□□□□ 0.12
NcanP55066 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NcanP55066 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NcanP55066 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms