Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox1P53783 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox1P53783 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sox1P53783 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Sox1P53783 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox1P53783 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.4■□□□□ 0.06
Sox1P53783 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.4■□□□□ 0.06
Sox1P53783 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Gm37424-201ENSMUST00000191727 561 ntBASIC15.4■□□□□ 0.06
Sox1P53783 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.4■□□□□ 0.06
Sox1P53783 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Sox1P53783 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sox1P53783 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox1P53783 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.06
Sox1P53783 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sox1P53783 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.39■□□□□ 0.05
Sox1P53783 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.39■□□□□ 0.05
Sox1P53783 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sox1P53783 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.39■□□□□ 0.05
Sox1P53783 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.39■□□□□ 0.05
Sox1P53783 Gm15678-201ENSMUST00000117573 960 ntBASIC15.39■□□□□ 0.05
Sox1P53783 Gm13226-201ENSMUST00000117838 404 ntBASIC15.39■□□□□ 0.05
Sox1P53783 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.39■□□□□ 0.05
Sox1P53783 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.39■□□□□ 0.05
Sox1P53783 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sox1P53783 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sox1P53783 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox1P53783 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sox1P53783 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.38■□□□□ 0.05
Sox1P53783 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.38■□□□□ 0.05
Sox1P53783 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.38■□□□□ 0.05
Sox1P53783 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.38■□□□□ 0.05
Sox1P53783 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Gm21854-201ENSMUST00000179901 471 ntBASIC15.38■□□□□ 0.05
Sox1P53783 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Sox1P53783 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.38■□□□□ 0.05
Sox1P53783 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.38■□□□□ 0.05
Sox1P53783 Haglr-201ENSMUST00000100000 2085 ntBASIC15.38■□□□□ 0.05
Sox1P53783 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sox1P53783 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sox1P53783 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sox1P53783 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.38■□□□□ 0.05
Sox1P53783 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox1P53783 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms