Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Gm25144-201ENSMUST00000179561 110 ntBASIC18.15■□□□□ 0.5
Atp6v1aP50516 Gm25352-201ENSMUST00000179815 110 ntBASIC18.15■□□□□ 0.5
Atp6v1aP50516 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Gm28630-201ENSMUST00000187806 498 ntBASIC18.15■□□□□ 0.5
Atp6v1aP50516 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.15■□□□□ 0.5
Atp6v1aP50516 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp6v1aP50516 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.15■□□□□ 0.5
Atp6v1aP50516 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.15■□□□□ 0.5
Atp6v1aP50516 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atp6v1aP50516 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atp6v1aP50516 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.14■□□□□ 0.49
Atp6v1aP50516 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Atp6v1aP50516 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Gm18766-201ENSMUST00000189811 808 ntBASIC18.13■□□□□ 0.49
Atp6v1aP50516 Gm7730-201ENSMUST00000212486 454 ntBASIC18.13■□□□□ 0.49
Atp6v1aP50516 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1aP50516 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.12■□□□□ 0.49
Atp6v1aP50516 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1aP50516 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1aP50516 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms