Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Gm6222-201ENSMUST00000120787 396 ntBASIC15.92■□□□□ 0.14
HttP42859 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.92■□□□□ 0.14
HttP42859 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.92■□□□□ 0.14
HttP42859 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HttP42859 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.92■□□□□ 0.14
HttP42859 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.91■□□□□ 0.14
HttP42859 Mir7654-201ENSMUST00000185082 70 ntBASIC15.91■□□□□ 0.14
HttP42859 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HttP42859 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HttP42859 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.91■□□□□ 0.14
HttP42859 Gm18307-201ENSMUST00000206864 949 ntBASIC15.91■□□□□ 0.14
HttP42859 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HttP42859 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HttP42859 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.9■□□□□ 0.14
HttP42859 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.9■□□□□ 0.14
HttP42859 Gm17794-201ENSMUST00000220252 955 ntBASIC15.9■□□□□ 0.14
HttP42859 Gm7399-201ENSMUST00000032395 858 ntBASIC15.9■□□□□ 0.14
HttP42859 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.9■□□□□ 0.14
HttP42859 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Gm37714-201ENSMUST00000194742 342 ntBASIC15.9■□□□□ 0.14
HttP42859 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.9■□□□□ 0.14
HttP42859 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.9■□□□□ 0.14
HttP42859 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HttP42859 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
HttP42859 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.9■□□□□ 0.14
HttP42859 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HttP42859 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Dancr-204ENSMUST00000132389 2347 ntBASIC15.89■□□□□ 0.13
HttP42859 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
HttP42859 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.89■□□□□ 0.13
HttP42859 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.89■□□□□ 0.13
HttP42859 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.89■□□□□ 0.13
HttP42859 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HttP42859 Gm15808-201ENSMUST00000119046 604 ntBASIC15.89■□□□□ 0.13
HttP42859 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.89■□□□□ 0.13
HttP42859 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.89■□□□□ 0.13
HttP42859 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HttP42859 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Gm22018-201ENSMUST00000104357 131 ntBASIC15.88■□□□□ 0.13
HttP42859 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
HttP42859 Mir1894-201ENSMUST00000122802 81 ntBASIC15.88■□□□□ 0.13
HttP42859 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.88■□□□□ 0.13
HttP42859 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.88■□□□□ 0.13
HttP42859 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.88■□□□□ 0.13
HttP42859 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.88■□□□□ 0.13
HttP42859 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
HttP42859 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms