Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox6P40645 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox6P40645 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sox6P40645 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Sox6P40645 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox6P40645 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Sox6P40645 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.25□□□□□ -0.13
Sox6P40645 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.25□□□□□ -0.13
Sox6P40645 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.25□□□□□ -0.13
Sox6P40645 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.25□□□□□ -0.13
Sox6P40645 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.25□□□□□ -0.13
Sox6P40645 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.25□□□□□ -0.13
Sox6P40645 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sox6P40645 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Sox6P40645 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox6P40645 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sox6P40645 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox6P40645 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sox6P40645 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.24□□□□□ -0.13
Sox6P40645 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.24□□□□□ -0.13
Sox6P40645 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox6P40645 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox6P40645 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox6P40645 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox6P40645 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox6P40645 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox6P40645 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sox6P40645 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Sox6P40645 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Sox6P40645 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox6P40645 Gm25406-201ENSMUST00000157599 105 ntBASIC14.23□□□□□ -0.13
Sox6P40645 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Sox6P40645 Gm27867-201ENSMUST00000184778 125 ntBASIC14.23□□□□□ -0.13
Sox6P40645 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sox6P40645 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.23□□□□□ -0.13
Sox6P40645 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sox6P40645 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.23□□□□□ -0.13
Sox6P40645 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox6P40645 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Sox6P40645 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox6P40645 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms