Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.5□□□□□ -0.09
Cdh4P39038 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdh4P39038 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Cdh4P39038 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.5□□□□□ -0.09
Cdh4P39038 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.5□□□□□ -0.09
Cdh4P39038 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdh4P39038 Gm27300-201ENSMUST00000184085 97 ntBASIC14.5□□□□□ -0.09
Cdh4P39038 Gm27335-201ENSMUST00000184758 97 ntBASIC14.5□□□□□ -0.09
Cdh4P39038 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdh4P39038 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdh4P39038 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Cdh4P39038 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Asic1-205ENSMUST00000228185 1818 ntBASIC14.5□□□□□ -0.09
Cdh4P39038 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cdh4P39038 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.49□□□□□ -0.09
Cdh4P39038 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdh4P39038 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh4P39038 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdh4P39038 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.48□□□□□ -0.09
Cdh4P39038 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.48□□□□□ -0.09
Cdh4P39038 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cdh4P39038 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.48□□□□□ -0.09
Cdh4P39038 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh4P39038 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdh4P39038 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cdh4P39038 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdh4P39038 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Cdh4P39038 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms