Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm13884-201ENSMUST00000118103 829 ntBASIC13.29□□□□□ -0.28
Upk2P38575 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Upk2P38575 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.29□□□□□ -0.28
Upk2P38575 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 AV026068-213ENSMUST00000223675 1171 ntBASIC13.29□□□□□ -0.28
Upk2P38575 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upk2P38575 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Upk2P38575 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.29□□□□□ -0.28
Upk2P38575 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Upk2P38575 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Upk2P38575 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Upk2P38575 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.28□□□□□ -0.28
Upk2P38575 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk2P38575 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.28□□□□□ -0.28
Upk2P38575 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.28□□□□□ -0.28
Upk2P38575 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk2P38575 Gm45167-201ENSMUST00000208007 322 ntBASIC13.28□□□□□ -0.28
Upk2P38575 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.28□□□□□ -0.28
Upk2P38575 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upk2P38575 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upk2P38575 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upk2P38575 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upk2P38575 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Upk2P38575 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk2P38575 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk2P38575 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk2P38575 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Upk2P38575 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk2P38575 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Upk2P38575 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk2P38575 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Upk2P38575 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.27□□□□□ -0.29
Upk2P38575 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Upk2P38575 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.27□□□□□ -0.29
Upk2P38575 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Upk2P38575 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.27□□□□□ -0.29
Upk2P38575 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.27□□□□□ -0.29
Upk2P38575 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Upk2P38575 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.27□□□□□ -0.29
Upk2P38575 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk2P38575 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Upk2P38575 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk2P38575 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Upk2P38575 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk2P38575 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk2P38575 Gm43767-201ENSMUST00000198933 381 ntBASIC13.26□□□□□ -0.29
Upk2P38575 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.26□□□□□ -0.29
Upk2P38575 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms