Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Foxa1P35582 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Foxa1P35582 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Foxa1P35582 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Foxa1P35582 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Foxa1P35582 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14□□□□□ -0.17
Foxa1P35582 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Psmb5-202ENSMUST00000227257 622 ntBASIC14□□□□□ -0.17
Foxa1P35582 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14□□□□□ -0.17
Foxa1P35582 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14□□□□□ -0.17
Foxa1P35582 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa1P35582 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Foxa1P35582 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Foxa1P35582 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.99□□□□□ -0.17
Foxa1P35582 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Foxa1P35582 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Foxa1P35582 Gm14140-201ENSMUST00000119999 995 ntBASIC13.99□□□□□ -0.17
Foxa1P35582 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.99□□□□□ -0.17
Foxa1P35582 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Foxa1P35582 Gm18206-201ENSMUST00000207027 926 ntBASIC13.99□□□□□ -0.17
Foxa1P35582 Gm5364-201ENSMUST00000216789 889 ntBASIC13.99□□□□□ -0.17
Foxa1P35582 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Foxa1P35582 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.99□□□□□ -0.17
Foxa1P35582 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Foxa1P35582 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa1P35582 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Celf4-206ENSMUST00000224553 1729 ntBASIC13.98□□□□□ -0.17
Foxa1P35582 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.98□□□□□ -0.17
Foxa1P35582 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.98□□□□□ -0.17
Foxa1P35582 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.98□□□□□ -0.17
Foxa1P35582 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Foxa1P35582 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Foxa1P35582 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.98□□□□□ -0.17
Foxa1P35582 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms