Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.36■□□□□ 0.05
Slc6a13P31649 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.36■□□□□ 0.05
Slc6a13P31649 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.36■□□□□ 0.05
Slc6a13P31649 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.36■□□□□ 0.05
Slc6a13P31649 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a13P31649 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.36■□□□□ 0.05
Slc6a13P31649 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Slc6a13P31649 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.36■□□□□ 0.05
Slc6a13P31649 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Slc6a13P31649 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a13P31649 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a13P31649 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.35■□□□□ 0.05
Slc6a13P31649 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Efs-202ENSMUST00000227037 2540 ntBASIC15.35■□□□□ 0.05
Slc6a13P31649 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.35■□□□□ 0.05
Slc6a13P31649 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
Slc6a13P31649 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.35■□□□□ 0.05
Slc6a13P31649 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Slc6a13P31649 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Slc6a13P31649 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a13P31649 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.35■□□□□ 0.05
Slc6a13P31649 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a13P31649 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.34■□□□□ 0.05
Slc6a13P31649 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a13P31649 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Slc6a13P31649 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.34■□□□□ 0.05
Slc6a13P31649 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms