Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.06■□□□□ 0
Nckap1P28660 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.06■□□□□ 0
Nckap1P28660 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.06■□□□□ 0
Nckap1P28660 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Gm18889-201ENSMUST00000174284 929 ntBASIC15.06■□□□□ 0
Nckap1P28660 Auts2-212ENSMUST00000178555 309 ntBASIC15.06■□□□□ 0
Nckap1P28660 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Mir6956-201ENSMUST00000183598 62 ntBASIC15.06■□□□□ 0
Nckap1P28660 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nckap1P28660 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.06■□□□□ 0
Nckap1P28660 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.06■□□□□ 0
Nckap1P28660 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.06■□□□□ 0
Nckap1P28660 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nckap1P28660 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nckap1P28660 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nckap1P28660 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nckap1P28660 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Nckap1P28660 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Nckap1P28660 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nckap1P28660 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nckap1P28660 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nckap1P28660 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nckap1P28660 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nckap1P28660 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.05■□□□□ -0
Nckap1P28660 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.05■□□□□ -0
Nckap1P28660 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.05■□□□□ -0
Nckap1P28660 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nckap1P28660 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Nckap1P28660 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nckap1P28660 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nckap1P28660 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nckap1P28660 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Gm13616-201ENSMUST00000120600 222 ntBASIC15.04■□□□□ -0
Nckap1P28660 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.04■□□□□ -0
Nckap1P28660 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.04■□□□□ -0
Nckap1P28660 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.04■□□□□ -0
Nckap1P28660 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Gm20553-201ENSMUST00000204205 844 ntBASIC15.04■□□□□ -0
Nckap1P28660 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Nckap1P28660 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.04■□□□□ -0
Nckap1P28660 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Nckap1P28660 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nckap1P28660 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nckap1P28660 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Nckap1P28660 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Nckap1P28660 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.03■□□□□ -0
Nckap1P28660 Gm43125-201ENSMUST00000201724 730 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms