Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gm43930-201ENSMUST00000203868 845 ntBASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.4□□□□□ -0.42
Tnfrsf9P20334 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.4□□□□□ -0.43
Tnfrsf9P20334 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfrsf9P20334 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Gm17271-201ENSMUST00000165535 355 ntBASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Mir6956-201ENSMUST00000183598 62 ntBASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Gm21156-201ENSMUST00000189693 869 ntBASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf9P20334 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms