Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdx1P18111 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cdx1P18111 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cdx1P18111 Gm6623-201ENSMUST00000173570 544 ntBASIC12.26□□□□□ -0.45
Cdx1P18111 Gm27357-201ENSMUST00000183754 135 ntBASIC12.26□□□□□ -0.45
Cdx1P18111 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.26□□□□□ -0.45
Cdx1P18111 Gm45328-201ENSMUST00000210942 917 ntBASIC12.26□□□□□ -0.45
Cdx1P18111 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cdx1P18111 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Cdx1P18111 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdx1P18111 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cdx1P18111 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdx1P18111 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdx1P18111 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.25□□□□□ -0.45
Cdx1P18111 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Cdx1P18111 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdx1P18111 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdx1P18111 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Cdx1P18111 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Mir3081-201ENSMUST00000175305 84 ntBASIC12.25□□□□□ -0.45
Cdx1P18111 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Cdx1P18111 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Cdx1P18111 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdx1P18111 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdx1P18111 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdx1P18111 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Cdx1P18111 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cdx1P18111 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.24□□□□□ -0.45
Cdx1P18111 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdx1P18111 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Gm27742-201ENSMUST00000184667 60 ntBASIC12.24□□□□□ -0.45
Cdx1P18111 Gm37722-201ENSMUST00000193757 208 ntBASIC12.24□□□□□ -0.45
Cdx1P18111 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms