Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UbbP0CG49 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.19□□□□□ -0.3
UbbP0CG49 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.19□□□□□ -0.3
UbbP0CG49 Gm25016-201ENSMUST00000158399 131 ntBASIC13.19□□□□□ -0.3
UbbP0CG49 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.19□□□□□ -0.3
UbbP0CG49 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UbbP0CG49 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.19□□□□□ -0.3
UbbP0CG49 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UbbP0CG49 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.19□□□□□ -0.3
UbbP0CG49 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.19□□□□□ -0.3
UbbP0CG49 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.19□□□□□ -0.3
UbbP0CG49 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
UbbP0CG49 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.19□□□□□ -0.3
UbbP0CG49 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UbbP0CG49 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UbbP0CG49 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.18□□□□□ -0.3
UbbP0CG49 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UbbP0CG49 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UbbP0CG49 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.18□□□□□ -0.3
UbbP0CG49 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.18□□□□□ -0.3
UbbP0CG49 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.18□□□□□ -0.3
UbbP0CG49 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.18□□□□□ -0.3
UbbP0CG49 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UbbP0CG49 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
UbbP0CG49 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.17□□□□□ -0.3
UbbP0CG49 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
UbbP0CG49 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
UbbP0CG49 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UbbP0CG49 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UbbP0CG49 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UbbP0CG49 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms