Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp6P0C0A3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chmp6P0C0A3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp6P0C0A3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp6P0C0A3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Gm12350-201ENSMUST00000121208 462 ntBASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Chmp6P0C0A3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp6P0C0A3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Gm37153-201ENSMUST00000193637 231 ntBASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp6P0C0A3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Gm13036-201ENSMUST00000117799 748 ntBASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp6P0C0A3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms