Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hoxc9P09633 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc9P09633 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.52■□□□□ 0.72
Hoxc9P09633 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc9P09633 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc9P09633 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxc9P09633 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxc9P09633 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxc9P09633 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxc9P09633 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Hoxc9P09633 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxc9P09633 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Hoxc9P09633 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.51■□□□□ 0.71
Hoxc9P09633 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc9P09633 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.5■□□□□ 0.71
Hoxc9P09633 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hoxc9P09633 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hoxc9P09633 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hoxc9P09633 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Gm24543-201ENSMUST00000103867 82 ntBASIC19.5■□□□□ 0.71
Hoxc9P09633 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.5■□□□□ 0.71
Hoxc9P09633 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Gm11424-201ENSMUST00000121929 829 ntBASIC19.5■□□□□ 0.71
Hoxc9P09633 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.5■□□□□ 0.71
Hoxc9P09633 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hoxc9P09633 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc9P09633 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Hoxc9P09633 Syt7-204ENSMUST00000223586 1344 ntBASIC19.5■□□□□ 0.71
Hoxc9P09633 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Hoxc9P09633 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc9P09633 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc9P09633 Gm16215-201ENSMUST00000161990 637 ntBASIC19.49■□□□□ 0.71
Hoxc9P09633 Shd-206ENSMUST00000225145 998 ntBASIC19.49■□□□□ 0.71
Hoxc9P09633 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc9P09633 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc9P09633 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxc9P09633 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc9P09633 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Gm7488-201ENSMUST00000117148 684 ntBASIC19.48■□□□□ 0.71
Hoxc9P09633 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.48■□□□□ 0.71
Hoxc9P09633 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms