Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PrnpP04925 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PrnpP04925 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PrnpP04925 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PrnpP04925 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.64■□□□□ 0.09
PrnpP04925 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PrnpP04925 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PrnpP04925 Gm18766-201ENSMUST00000189811 808 ntBASIC15.63■□□□□ 0.09
PrnpP04925 Gm43767-201ENSMUST00000198933 381 ntBASIC15.63■□□□□ 0.09
PrnpP04925 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.63■□□□□ 0.09
PrnpP04925 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PrnpP04925 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.63■□□□□ 0.09
PrnpP04925 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.63■□□□□ 0.09
PrnpP04925 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PrnpP04925 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.63■□□□□ 0.09
PrnpP04925 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.62■□□□□ 0.09
PrnpP04925 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PrnpP04925 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.62■□□□□ 0.09
PrnpP04925 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.62■□□□□ 0.09
PrnpP04925 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PrnpP04925 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.62■□□□□ 0.09
PrnpP04925 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PrnpP04925 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.62■□□□□ 0.09
PrnpP04925 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PrnpP04925 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.61■□□□□ 0.09
PrnpP04925 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.61■□□□□ 0.09
PrnpP04925 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PrnpP04925 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.61■□□□□ 0.09
PrnpP04925 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PrnpP04925 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.6■□□□□ 0.09
PrnpP04925 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.6■□□□□ 0.09
PrnpP04925 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PrnpP04925 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PrnpP04925 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PrnpP04925 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PrnpP04925 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PrnpP04925 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms