Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxa3P02831 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.72□□□□□ -0.37
Hoxa3P02831 Gm23935-201ENSMUST00000102303 57 ntBASIC12.72□□□□□ -0.37
Hoxa3P02831 Gm24270-201ENSMUST00000102326 57 ntBASIC12.72□□□□□ -0.37
Hoxa3P02831 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxa3P02831 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxa3P02831 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Gm24245-201ENSMUST00000157318 57 ntBASIC12.72□□□□□ -0.37
Hoxa3P02831 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.72□□□□□ -0.37
Hoxa3P02831 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.72□□□□□ -0.37
Hoxa3P02831 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.72□□□□□ -0.37
Hoxa3P02831 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxa3P02831 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxa3P02831 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxa3P02831 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Gm14822-201ENSMUST00000122247 291 ntBASIC12.71□□□□□ -0.37
Hoxa3P02831 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.71□□□□□ -0.37
Hoxa3P02831 Mir8117-201ENSMUST00000184773 107 ntBASIC12.71□□□□□ -0.37
Hoxa3P02831 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.71□□□□□ -0.37
Hoxa3P02831 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Hoxa3P02831 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxa3P02831 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxa3P02831 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxa3P02831 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Hoxa3P02831 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.71□□□□□ -0.38
Hoxa3P02831 Sybu-209ENSMUST00000228639 4113 ntBASIC12.71□□□□□ -0.38
Hoxa3P02831 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxa3P02831 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxa3P02831 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxa3P02831 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.71□□□□□ -0.38
Hoxa3P02831 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxa3P02831 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Gm24513-201ENSMUST00000174964 138 ntBASIC12.7□□□□□ -0.38
Hoxa3P02831 Gm17968-201ENSMUST00000194902 784 ntBASIC12.7□□□□□ -0.38
Hoxa3P02831 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.7□□□□□ -0.38
Hoxa3P02831 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms