Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.4■□□□□ 0.54
Col4a1P02463 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.4■□□□□ 0.54
Col4a1P02463 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Col4a1P02463 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.4■□□□□ 0.54
Col4a1P02463 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Gm27838-201ENSMUST00000184829 128 ntBASIC18.4■□□□□ 0.54
Col4a1P02463 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.4■□□□□ 0.54
Col4a1P02463 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.4■□□□□ 0.54
Col4a1P02463 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Col4a1P02463 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Col4a1P02463 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col4a1P02463 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.39■□□□□ 0.54
Col4a1P02463 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Col4a1P02463 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.39■□□□□ 0.53
Col4a1P02463 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.39■□□□□ 0.53
Col4a1P02463 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.39■□□□□ 0.53
Col4a1P02463 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Col4a1P02463 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a1P02463 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col4a1P02463 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.38■□□□□ 0.53
Col4a1P02463 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Gm42612-201ENSMUST00000197986 623 ntBASIC18.38■□□□□ 0.53
Col4a1P02463 Gm43170-201ENSMUST00000199827 612 ntBASIC18.38■□□□□ 0.53
Col4a1P02463 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col4a1P02463 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Col4a1P02463 Asic1-205ENSMUST00000228185 1818 ntBASIC18.38■□□□□ 0.53
Col4a1P02463 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.38■□□□□ 0.53
Col4a1P02463 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.38■□□□□ 0.53
Col4a1P02463 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col4a1P02463 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.38■□□□□ 0.53
Col4a1P02463 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col4a1P02463 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.38■□□□□ 0.53
Col4a1P02463 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col4a1P02463 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a1P02463 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Col4a1P02463 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.37■□□□□ 0.53
Col4a1P02463 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Col4a1P02463 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.37■□□□□ 0.53
Col4a1P02463 Gm12859-201ENSMUST00000117834 427 ntBASIC18.37■□□□□ 0.53
Col4a1P02463 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.37■□□□□ 0.53
Col4a1P02463 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.37■□□□□ 0.53
Col4a1P02463 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.37■□□□□ 0.53
Col4a1P02463 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.37■□□□□ 0.53
Col4a1P02463 Gm46209-201ENSMUST00000217912 553 ntBASIC18.37■□□□□ 0.53
Col4a1P02463 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a1P02463 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Col4a1P02463 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.36■□□□□ 0.53
Col4a1P02463 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.36■□□□□ 0.53
Col4a1P02463 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.36■□□□□ 0.53
Col4a1P02463 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.36■□□□□ 0.53
Col4a1P02463 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms