Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.7□□□□□ -0.7
Hbb-b1P02088 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Gm42545-201ENSMUST00000202755 922 ntBASIC10.7□□□□□ -0.7
Hbb-b1P02088 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hbb-b1P02088 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hbb-b1P02088 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.68□□□□□ -0.7
Hbb-b1P02088 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.68□□□□□ -0.7
Hbb-b1P02088 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Gm4968-201ENSMUST00000071458 858 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms